BaseSpace Sequence Hub
by Illumina
Illumina cloud for storing, managing and analyzing genomic sequencing runs and data.
- Category
- Industry Solutions
- Type
- Life sciences
- Interface
- REST API
- Built with
- Connect Any API
- Credentials
- OAuth 2.0, Access token
02Data
What you can sync.
- Runs
- Projects
- Biosamples
- Datasets
- Analyses
Report on BaseSpace Sequence Hub runs in DataPrism BI and ask an AI Mind questions about it in plain words.
Need more? Name any other BaseSpace Sequence Hub data the API returns, and the AI adds it to the connector.
03Credentials
Credentials you will need.
- OAuth 2.0 (client ID, client secret, refresh token)
- An access token
BaseSpace Sequence Hub uses OAuth 2.0 (client ID, client secret, refresh token) or an access token. You add the credentials once, when the AI asks for them, and it tells you where to create them in Illumina if you need help.
04How it works
How it works in DataMind.
-
Pick BaseSpace Sequence Hub.
Open Lake, pick BaseSpace Sequence Hub in the source picker and name the connection. Connect Any API opens with a ready prompt that points the AI at the BaseSpace Sequence Hub API docs.
-
Answer a few questions.
The AI reads the BaseSpace Sequence Hub documentation, then asks which credentials you will use, which data to sync (for example runs and projects), whether you want a one-time load or a recurring sync, and which accounts or filters apply.
-
Your data lands in Lake.
It builds the connector, tests it and shows you sample rows. Then BaseSpace Sequence Hub data loads into your Lake on your schedule, ready for the Warehouse, DataPrism BI and AI Minds.
